Transcript: ENSDART00000142289.2 nalcn-203

Description

sodium leak channel, non-selective [Source:ZFIN;Acc:ZDB-GENE-050410-12]

Gene Synonyms

zgc:113349

Location

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 181 variant alleles and maps to 20 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000048469.9	nalcn-201	5548	1742aa	ENSDARP00000048468.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QCP2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135022.3	nalcn-202	5268	1717aa	ENSDARP00000117434.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000145204.2	nalcn-204	3195	409aa	ENSDARP00000117199.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000186889.1	nalcn-205	2879	384aa	ENSDARP00000151440.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000142289.2	nalcn-203	506	168aa	ENSDARP00000114064.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 506 bps, Translation length: 168 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000142289.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.