Transcript: ENSDART00000142276.2 rbm17-202

Description

RNA binding motif protein 17 [Source:ZFIN;Acc:ZDB-GENE-040426-817]

Gene Synonyms

zgc:55840

Location

About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 235 variant alleles and maps to 154 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000044043.7	rbm17-201	1759	418aa	ENSDARP00000044042.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZVN6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186524.1	rbm17-203	1276	418aa	ENSDARP00000153954.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZVN6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142276.2	rbm17-202	644	176aa	ENSDARP00000118863.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LVD1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 644 bps, Translation length: 176 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000142276.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.