Transcript: ENSDART00000142225.3 tmem181-203

Description

transmembrane protein 181 [Source:ZFIN;Acc:ZDB-GENE-060503-309]

Gene Synonyms

si:ch211-222h17.5, si:ch211-51e12.4

Location

About this transcript

This transcript has 2 exons, is associated with 542 variant alleles and maps to 74 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000103645.6	tmem181-201	2431	530aa	ENSDARP00000094421.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QYZ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000163436.2	tmem181-204	2800	524aa	ENSDARP00000141130.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IYB4	-
ENSDART00000139832.3	tmem181-202	609	172aa	ENSDARP00000120429.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000142225.3	tmem181-203	869	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 869 bps,

Version

ENSDART00000142225.3

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.