Transcript: ENSDART00000142220.3 vtcn1-202

Description

V-set domain containing T cell activation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-070912-388]

Gene Synonyms

si:dkey-174k18.6

Location

About this transcript

This transcript has 4 exons, is annotated with 13 domains and features, is associated with 234 variant alleles and maps to 74 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109680.5	vtcn1-201	2081	268aa	ENSDARP00000101000.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FD88	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142220.3	vtcn1-202	842	237aa	ENSDARP00000114047.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QDF0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 842 bps, Translation length: 237 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000142220.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.