Transcript: ENSDART00000142219.2 si:ch73-27e22.4-202

Description

si:ch73-27e22.4 [Source:ZFIN;Acc:ZDB-GENE-070705-232]

Location

About this transcript

This transcript has 2 exons, is annotated with 11 domains and features, is associated with 305 variant alleles and maps to 108 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000059473.6	si:ch73-27e22.4-201	2086	409aa	ENSDARP00000059472.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QSS5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142219.2	si:ch73-27e22.4-202	709	207aa	ENSDARP00000117072.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QIL8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 709 bps, Translation length: 207 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000142219.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.