Transcript: ENSDART00000142182.3 luc7l-205

Description

LUC7-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-111]

Gene Synonyms

wu:fb51e07, wu:fz47d12, zgc:101760, zgc:86815

Location

Chromosome 24: 39,641,991-39,654,132 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 10 domains and features, is associated with 606 variant alleles and maps to 145 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000055903.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000078313.6	luc7l-201	1784	364aa	ENSDARP00000072775.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R8J8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000142182.3	luc7l-205	1980	333aa	ENSDARP00000121911.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QE89	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000137218.3	luc7l-203	488	44aa	ENSDARP00000120824.1	Nonsense mediated decay	E9QIH9	-
ENSDART00000137684.2	luc7l-204	917	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000133284.2	luc7l-202	811	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,980 bps, Translation length: 333 residues

Version

ENSDART00000142182.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000142182.3 luc7l-205

Summary

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Transcript: ENSDART00000142182.3 luc7l-205

Summary

About Us

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