Transcript: ENSDART00000142118.2 slc25a39-202

Description

solute carrier family 25 member 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1250]

Location

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 388 variant alleles and maps to 107 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000014021.8	slc25a39-201	2063	359aa	ENSDARP00000005911.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QVQ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151677.3	slc25a39-203	652	175aa	ENSDARP00000125965.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000142118.2	slc25a39-202	650	170aa	ENSDARP00000118659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 650 bps, Translation length: 170 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000142118.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.