Transcript: ENSDART00000142091.3 STX3-202

Description

syntaxin 3a [Source:ZFIN;Acc:ZDB-GENE-070620-13]

Location

About this transcript

This transcript has 11 exons, is associated with 338 variant alleles and maps to 99 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146962.2	STX3-201	1697	285aa	ENSDARP00000118118.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A651	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162200.2	STX3-203	978	325aa	ENSDARP00000132795.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000142091.3	STX3-202	1443	325aa	ENSDARP00000113682.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,443 bps, Translation length: 325 residues

Version

ENSDART00000142091.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.