Transcript: ENSDART00000142076.2 usp11-203

Description

ubiquitin specific peptidase 11 [Source:ZFIN;Acc:ZDB-GENE-081104-421]

Location

About this transcript

This transcript has 14 exons, is annotated with 14 domains and features, is associated with 492 variant alleles and maps to 93 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000075624.7	usp11-201	2973	990aa	ENSDARP00000070106.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QPF4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142076.2	usp11-203	1794	598aa	ENSDARP00000116590.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000131963.2	usp11-202	1161	254aa	ENSDARP00000113093.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 1,794 bps, Translation length: 598 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000142076.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.