Transcript: ENSDART00000142043.2 malt3-201

Description

MALT paracaspase 3 [Source:ZFIN;Acc:ZDB-GENE-050419-182]

Gene Synonyms

si:dkey-77f17.1

Location

About this transcript

This transcript has 15 exons, is annotated with 20 domains and features, is associated with 1042 variant alleles and maps to 152 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000142043.2	malt3-201	2006	627aa	ENSDARP00000118301.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1MT63	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000181497.1	malt3-202	2175	516aa	ENSDARP00000154295.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QNL4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 2,006 bps, Translation length: 627 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000142043.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.