Transcript: ENSDART00000142038.2 CMTR1-203

Description

cap methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-696]

Location

Chromosome 23: 35,389,266-35,396,845 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 547 variant alleles and maps to 148 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000030830.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000049373.7	CMTR1-202	3055	829aa	ENSDARP00000049372.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5C5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171357.3	CMTR1-205	4365	829aa	ENSDARP00000131572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5C5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181978.1	CMTR1-204	4296	806aa	ENSDARP00000151962.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000142038.2	CMTR1-203	759	192aa	ENSDARP00000120932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000145597.2	CMTR1-201	740	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 759 bps, Translation length: 192 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000142038.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000142038.2 CMTR1-203

Summary

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Transcript: ENSDART00000142038.2 CMTR1-203

Summary

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