Transcript: ENSDART00000142031.4 slc26a6-202

Description

solute carrier family 26 member 6 [Source:ZFIN;Acc:ZDB-GENE-081105-83]

Location

Chromosome 8: 26,253,252-26,267,110 forward strand.

About this transcript

This transcript has 19 exons, is annotated with 52 domains and features, is associated with 268 variant alleles and maps to 207 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000097292.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000142031.4	slc26a6-202	2388	647aa	ENSDARP00000112964.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000113763.4	slc26a6-201	1689	562aa	ENSDARP00000103206.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PRF4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000147411.3	slc26a6-203	748	224aa	ENSDARP00000115561.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 19, Coding exons: 18, Transcript length: 2,388 bps, Translation length: 647 residues

Version

ENSDART00000142031.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000142031.4 slc26a6-202

Summary

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Transcript: ENSDART00000142031.4 slc26a6-202

Summary

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