Transcript: ENSDART00000141965.2 atad1a-202

Description

ATPase family AAA domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030616-593]

Location

About this transcript

This transcript has 2 exons, is associated with 274 variant alleles and maps to 104 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000035859.8	atad1a-201	1487	380aa	ENSDARP00000035974.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZZ25-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000190457.1	atad1a-204	2475	382aa	ENSDARP00000149707.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000179244.2	atad1a-203	2036	382aa	ENSDARP00000143743.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000192744.1	atad1a-205	1693	411aa	ENSDARP00000148371.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000141965.2	atad1a-202	854	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 854 bps,

Version

ENSDART00000141965.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.