Transcript: ENSDART00000141941.5 zfpm2a-203

Description

zinc finger protein, FOG family member 2a [Source:ZFIN;Acc:ZDB-GENE-060130-4]

Gene Synonyms

fog2a, zgc:152696

Location

Chromosome 16: 43,818,896-43,971,258 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 40 domains and features, is associated with 105 variant alleles and maps to 185 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000040123.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000058685.7	zfpm2a-201	4564	1142aa	ENSDARP00000058684.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R4T3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141941.5	zfpm2a-203	4142	1041aa	ENSDARP00000112530.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000190830.1	zfpm2a-205	4007	1141aa	ENSDARP00000155171.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000104583.5	zfpm2a-202	1126	195aa	ENSDARP00000095355.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000151936.2	zfpm2a-204	402	100aa	ENSDARP00000126387.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 4,142 bps, Translation length: 1,041 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000141941.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000141941.5 zfpm2a-203

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000141941.5 zfpm2a-203

Summary

About Us

Get help

Our sister sites

Follow us