Transcript: ENSDART00000141915.3 si:ch211-166a6.5-202

Description

si:ch211-166a6.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9913]

Location

About this transcript

This transcript has 27 exons, is annotated with 27 domains and features, is associated with 1361 variant alleles and maps to 260 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000141915.3	si:ch211-166a6.5-202	4194	1357aa	ENSDARP00000122535.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000191027.1	si:ch211-166a6.5-203	3977	1056aa	ENSDARP00000152618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139356.2	si:ch211-166a6.5-201	641	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 27, Coding exons: 27, Transcript length: 4,194 bps, Translation length: 1,357 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000141915.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.