Transcript: ENSDART00000141876.2 ftr30-202

Description

finTRIM family, member 30 [Source:ZFIN;Acc:ZDB-GENE-070912-106]

Gene Synonyms

si:ch211-150h8.4

Location

Chromosome 2: 59,190,666-59,205,441 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 25 domains and features, is associated with 100 variant alleles and maps to 367 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000095448.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000141876.2	ftr30-202	1561	508aa	ENSDARP00000119418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S650	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000056417.5	ftr30-201	750	249aa	ENSDARP00000056416.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QN31	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000182452.1	ftr30-203	735	244aa	ENSDARP00000146322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q1D8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,561 bps, Translation length: 508 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000141876.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000141876.2 ftr30-202

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Transcript: ENSDART00000141876.2 ftr30-202

Summary

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