Transcript: ENSDART00000141868.2 si:dkey-184a18.5-201

Description

si:dkey-184a18.5 [Source:ZFIN;Acc:ZDB-GENE-091204-187]

Gene Synonyms

im:7154516

Location

Chromosome 10: 16,061,655-16,067,194 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 163 variant alleles and maps to 86 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000095594.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000188728.1	si:dkey-184a18.5-203	339	112aa	ENSDARP00000154032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000141868.2	si:dkey-184a18.5-201	851	104aa	ENSDARP00000116545.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QBC6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000187266.1	si:dkey-184a18.5-202	330	109aa	ENSDARP00000146156.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 851 bps, Translation length: 104 residues

Version

ENSDART00000141868.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000141868.2 si:dkey-184a18.5-201

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Transcript: ENSDART00000141868.2 si:dkey-184a18.5-201

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