Transcript: ENSDART00000141841.2 PSMB7-202

Description

proteasome 20S subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]

Location

About this transcript

This transcript has 6 exons, is associated with 375 variant alleles and maps to 91 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000129749.4	PSMB7-203	1057	277aa	ENSDARP00000112303.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T002	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000055325.7	PSMB7-204	1048	286aa	ENSDARP00000055324.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PQK9	-
ENSDART00000133804.2	PSMB7-205	861	211aa	ENSDARP00000118428.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000141841.2	PSMB7-202	792	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000132467.3	PSMB7-201	787	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 792 bps,

Version

ENSDART00000141841.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.