Transcript: ENSDART00000141809.2 sfswap-201

Description

splicing factor SWAP [Source:ZFIN;Acc:ZDB-GENE-040426-931]

Gene Synonyms

sfrs8, srsf8, zgc:56184

Location

About this transcript

This transcript has 6 exons, is annotated with 14 domains and features, is associated with 1263 variant alleles and maps to 170 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143113.3	sfswap-202	3660	958aa	ENSDARP00000121684.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q5L3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141809.2	sfswap-201	1206	276aa	ENSDARP00000115086.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q7E8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,206 bps, Translation length: 276 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000141809.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.