Transcript: ENSDART00000141804.2 st6galnac1.2-202

Description

ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]

Location

Chromosome 12: 20,691,358-20,692,013 forward strand.

About this transcript

This transcript has 3 exons, is associated with 229 variant alleles and maps to 122 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000043816.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000064335.6	st6galnac1.2-201	1765	427aa	ENSDARP00000064334.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5P991	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153023.3	st6galnac1.2-203	942	246aa	ENSDARP00000127141.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000153370.2	st6galnac1.2-204	727	228aa	ENSDARP00000127333.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000141804.2	st6galnac1.2-202	469	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 469 bps,

Version

ENSDART00000141804.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000141804.2 st6galnac1.2-202

Summary

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Transcript: ENSDART00000141804.2 st6galnac1.2-202

Summary

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