Transcript: ENSDART00000141792.2 STAT1-203

Description

signal transducer and activator of transcription 1b [Source:ZFIN;Acc:ZDB-GENE-030616-23]

Location

Chromosome 9: 41,224,100-41,227,570 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 235 variant alleles and maps to 110 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000076182.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000000280.11	STAT1-205	4113	725aa	ENSDARP00000000280.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S789	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145674.3	STAT1-202	3189	725aa	ENSDARP00000115509.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S789	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141792.2	STAT1-203	535	178aa	ENSDARP00000116740.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000145312.2	STAT1-201	812	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000148337.2	STAT1-204	363	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 535 bps, Translation length: 178 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000141792.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000141792.2 STAT1-203

Summary

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Transcript: ENSDART00000141792.2 STAT1-203

Summary

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