Transcript: ENSDART00000141731.2 wscd1b-203

Description

WSC domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-091118-93]

Location

Chromosome 10: 38,000,061-38,005,573 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 478 variant alleles and maps to 40 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000078006.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000113112.5	wscd1b-201	5449	568aa	ENSDARP00000104300.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F082	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185102.1	wscd1b-204	5237	568aa	ENSDARP00000147281.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F082	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135480.3	wscd1b-202	1924	552aa	ENSDARP00000112690.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000141731.2	wscd1b-203	855	234aa	ENSDARP00000115787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 855 bps, Translation length: 234 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000141731.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000141731.2 wscd1b-203

Summary

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Transcript: ENSDART00000141731.2 wscd1b-203

Summary

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