Transcript: ENSDART00000141730.3 RABIF-201

Description

RAB interacting factor [Source:ZFIN;Acc:ZDB-GENE-040718-216]

Gene Synonyms

wu:fc54e04, zgc:92821

Location

Chromosome 11: 24,815,667-24,817,613 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 12 domains and features, is associated with 133 variant alleles and maps to 271 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000002690.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000115356.4	RABIF-203	1062	132aa	ENSDARP00000102249.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGQ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141730.3	RABIF-201	879	163aa	ENSDARP00000122975.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000146838.2	RABIF-202	793	145aa	ENSDARP00000117655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000142327.2	RABIF-204	557	132aa	ENSDARP00000121226.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGQ2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 879 bps, Translation length: 163 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000141730.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000141730.3 RABIF-201

Summary

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Transcript: ENSDART00000141730.3 RABIF-201

Summary

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