Transcript: ENSDART00000141614.3 si:ch211-14a17.11-202

Description

si:ch211-14a17.11 [Source:ZFIN;Acc:ZDB-GENE-030616-582]

Gene Synonyms

si:zc14a17.11, zgc:110048

Location

Chromosome 2: 38,225,427-38,229,714 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 2 domains and features, is associated with 200 variant alleles and maps to 204 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000054292.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131384.2	si:ch211-14a17.11-201	882	192aa	ENSDARP00000123563.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0R0G9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000159396.2	si:ch211-14a17.11-203	1039	192aa	ENSDARP00000136490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0R0G9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141614.3	si:ch211-14a17.11-202	809	148aa	ENSDARP00000117122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000192707.1	si:ch211-14a17.11-204	357	117aa	ENSDARP00000150076.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7MCA1	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 809 bps, Translation length: 148 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000141614.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000141614.3 si:ch211-14a17.11-202

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Transcript: ENSDART00000141614.3 si:ch211-14a17.11-202

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