Transcript: ENSDART00000141586.3 lmnb1-205

Description

lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]

Gene Synonyms

fc06g01, wu:fc06g01

Location

Chromosome 10: 16,036,246-16,043,748 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 15 domains and features, is associated with 207 variant alleles and maps to 111 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000044299.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000124502.4	lmnb1-202	3021	603aa	ENSDARP00000105955.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000065037.4	lmnb1-201	2975	588aa	ENSDARP00000065036.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QHC4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000188757.1	lmnb1-206	1919	588aa	ENSDARP00000153143.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QHC4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141586.3	lmnb1-205	1037	329aa	ENSDARP00000116004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135868.2	lmnb1-204	779	157aa	ENSDARP00000113714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000132918.2	lmnb1-203	796	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,037 bps, Translation length: 329 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000141586.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000141586.3 lmnb1-205

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000141586.3 lmnb1-205

Summary

About Us

Get help

Our sister sites

Follow us