Transcript: ENSDART00000141581.2 sephs1-202

Description

selenophosphate synthetase 1 [Source:NCBI gene;Acc:324947]

Gene Synonyms

wu:fc49b09, zgc:55304

Location

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 252 variant alleles and maps to 115 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000081143.6	sephs1-201	2113	392aa	ENSDARP00000075586.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZW38	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192807.1	sephs1-203	1182	392aa	ENSDARP00000148109.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZW38	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141581.2	sephs1-202	717	186aa	ENSDARP00000121969.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KPM5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 717 bps, Translation length: 186 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000141581.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.