Transcript: ENSDART00000141577.2 zufsp-202

Description

zinc finger containing ubiquitin peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-070209-211]

Location

About this transcript

This transcript has 4 exons, is associated with 224 variant alleles and maps to 78 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000084009.6	zufsp-201	2055	608aa	ENSDARP00000078444.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QAX5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141577.2	zufsp-202	677	108aa	ENSDARP00000122526.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 677 bps, Translation length: 108 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000141577.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.