Transcript: ENSDART00000141496.3 nlrc9-202

Description

NLR family CARD domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-070912-362]

Gene Synonyms

NACHT, LRR and PYD domains-containing protein 3 isoform X1, si:dkey-121n8.3

Location

About this transcript

This transcript has 10 exons, is annotated with 44 domains and features, is associated with 267 variant alleles and maps to 165 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000141496.3	nlrc9-202	3130	1044aa	ENSDARP00000116893.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8HAK4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000188847.1	nlrc9-205	2553	625aa	ENSDARP00000156737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QT42	-
ENSDART00000170395.2	nlrc9-203	2441	672aa	ENSDARP00000138733.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RAG5	-
ENSDART00000099437.5	nlrc9-201	2435	672aa	ENSDARP00000090210.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RAG5	-
ENSDART00000183327.1	nlrc9-204	243	80aa	ENSDARP00000150263.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QB67	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 3,130 bps, Translation length: 1,044 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000141496.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.