Transcript: ENSDART00000141495.3 hes6-203

Description

hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]

Gene Synonyms

her13.2

Location

About this transcript

This transcript has 5 exons, is annotated with 15 domains and features, is associated with 270 variant alleles and maps to 222 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000023040.8	hes6-201	1264	226aa	ENSDARP00000021078.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QMG5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141495.3	hes6-203	559	161aa	ENSDARP00000118664.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QI80	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000146818.2	hes6-204	794	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000131573.2	hes6-202	625	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 559 bps, Translation length: 161 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000141495.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.