Transcript: ENSDART00000141487.3 nectin3b-202

Description

nectin cell adhesion molecule 3b [Source:ZFIN;Acc:ZDB-GENE-050327-14]

Location

About this transcript

This transcript has 4 exons, is annotated with 12 domains and features, is associated with 538 variant alleles and maps to 60 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000147593.3	nectin3b-203	2383	574aa	ENSDARP00000121706.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q58EG3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000031205.9	nectin3b-201	2249	574aa	ENSDARP00000028921.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q58EG3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141487.3	nectin3b-202	788	200aa	ENSDARP00000118438.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 788 bps, Translation length: 200 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000141487.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.