Transcript: ENSDART00000141477.3 psma5-202

Description

proteasome 20S subunit alpha 5 [Source:ZFIN;Acc:ZDB-GENE-040625-96]

Gene Synonyms

zgc:86851

Location

About this transcript

This transcript has 9 exons, is annotated with 10 domains and features, is associated with 232 variant alleles and maps to 198 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000020655.7	psma5-201	1131	241aa	ENSDARP00000009133.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6TGV6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141477.3	psma5-202	861	240aa	ENSDARP00000120863.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000146495.2	psma5-203	761	195aa	ENSDARP00000113355.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 861 bps, Translation length: 240 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000141477.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.