Transcript: ENSDART00000141424.3 snapc4-203

Description

small nuclear RNA activating complex, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5794]

Location

Chromosome 5: 51,174,913-51,191,351 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 35 domains and features, is associated with 277 variant alleles and maps to 158 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000067673.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000097473.5	snapc4-201	9947	1561aa	ENSDARP00000088244.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QVS5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165870.2	snapc4-204	9852	1561aa	ENSDARP00000132199.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QVS5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141424.3	snapc4-203	1880	627aa	ENSDARP00000121534.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000132503.2	snapc4-202	631	85aa	ENSDARP00000124062.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 1,880 bps, Translation length: 627 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000141424.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000141424.3 snapc4-203

Summary

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Transcript: ENSDART00000141424.3 snapc4-203

Summary

About Us

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