Transcript: ENSDART00000141422.3 si:ch211-250k18.7-201

Description

si:ch211-250k18.7 [Source:ZFIN;Acc:ZDB-GENE-070912-246]

Gene Synonyms

si:ch211-250k18.3

Location

About this transcript

This transcript has 16 exons, is annotated with 73 domains and features, is associated with 682 variant alleles and maps to 415 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000141422.3	si:ch211-250k18.7-201	4695	1369aa	ENSDARP00000113623.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S8F8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000193522.1	si:ch211-250k18.7-202	1860	619aa	ENSDARP00000150700.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QB88	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193694.1	si:ch211-250k18.7-203	621	206aa	ENSDARP00000157144.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QU91	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 4,695 bps, Translation length: 1,369 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000141422.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.