Transcript: ENSDART00000141420.2 sgpp1b-201

Description

sphingosine-1-phosphate phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-090319-2]

Gene Synonyms

sgpp1, si:ch211-188i4.3, spp1

Location

About this transcript

This transcript has 3 exons, is annotated with 36 domains and features, is associated with 559 variant alleles and maps to 114 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000141420.2	sgpp1b-201	3196	423aa	ENSDARP00000114128.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000185478.1	sgpp1b-202	1269	422aa	ENSDARP00000151143.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 3,196 bps, Translation length: 423 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000141420.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.