Transcript: ENSDART00000141418.3 CYRIB-204

Description

family with sequence similarity 49 member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-9537]

Location

Chromosome 2: 32,215,455-32,237,916 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 4 domains and features, is associated with 408 variant alleles and maps to 141 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000020929.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000039717.6	CYRIB-206	1764	325aa	ENSDARP00000039716.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6TLE5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000056621.6	CYRIB-207	1740	256aa	ENSDARP00000056620.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T343	-
ENSDART00000141418.3	CYRIB-204	1180	256aa	ENSDARP00000122853.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T343	-
ENSDART00000146452.2	CYRIB-202	829	208aa	ENSDARP00000114808.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000145648.2	CYRIB-205	592	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000145704.2	CYRIB-203	598	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000133591.2	CYRIB-201	533	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,180 bps, Translation length: 256 residues

Version

ENSDART00000141418.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000141418.3 CYRIB-204

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000141418.3 CYRIB-204

Summary

About Us

Get help

Our sister sites

Follow us