Transcript: ENSDART00000141407.3 actb1-205

Description

actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]

Gene Synonyms

ACTB, B-ACTZF, actba, actine, bact, bactin1, bactzf, wu:fd18f05

Location

Chromosome 1: 8,650,096-8,652,655 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 11 domains and features, is associated with 489 variant alleles and maps to 224 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000037746.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000054987.7	actb1-201	1788	375aa	ENSDARP00000054986.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZVI7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193041.1	actb1-207	1215	129aa	ENSDARP00000145697.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000133319.3	actb1-202	1019	303aa	ENSDARP00000112639.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141407.3	actb1-205	924	129aa	ENSDARP00000116418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000138324.3	actb1-204	796	234aa	ENSDARP00000115259.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148067.2	actb1-206	769	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000135318.2	actb1-203	856	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 924 bps, Translation length: 129 residues

Version

ENSDART00000141407.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000141407.3 actb1-205

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Transcript: ENSDART00000141407.3 actb1-205

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