Transcript: ENSDART00000141373.2 si:rp71-36a1.1-201

Description

si:rp71-36a1.1 [Source:ZFIN;Acc:ZDB-GENE-050208-407]

Location

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 347 variant alleles and maps to 126 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000141373.2	si:rp71-36a1.1-201	1053	346aa	ENSDARP00000116838.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R0E1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000188536.1	si:rp71-36a1.1-202	4814	279aa	ENSDARP00000146235.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q173	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,053 bps, Translation length: 346 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000141373.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.