Transcript: ENSDART00000141339.4 si:dkey-16p6.1-202

Description

si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]

Location

About this transcript

This transcript has 11 exons, is annotated with 53 domains and features, is associated with 100 variant alleles and maps to 1083 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000141339.4	si:dkey-16p6.1-202	3596	1162aa	ENSDARP00000121149.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TS82	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000166019.2	si:dkey-16p6.1-204	3625	1023aa	ENSDARP00000133441.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000158639.2	si:dkey-16p6.1-203	1142	244aa	ENSDARP00000135897.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000137770.2	si:dkey-16p6.1-201	700	52aa	ENSDARP00000121680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 3,596 bps, Translation length: 1,162 residues

Version

ENSDART00000141339.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.