Transcript: ENSDART00000141205.3 zgc:103759-202

Description

zgc:103759 [Source:ZFIN;Acc:ZDB-GENE-041010-100]

Location

Chromosome 23: 18,702,518-18,707,494 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 87 variant alleles and maps to 132 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000019503.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000016765.7	zgc:103759-201	1155	208aa	ENSDARP00000003749.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000141205.3	zgc:103759-202	1143	201aa	ENSDARP00000119874.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QD97	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000144668.2	zgc:103759-203	540	178aa	ENSDARP00000113306.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,143 bps, Translation length: 201 residues

Version

ENSDART00000141205.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000141205.3 zgc:103759-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000141205.3 zgc:103759-202

Summary

About Us

Get help

Our sister sites

Follow us