Transcript: ENSDART00000141201.2 CCNA1-202

Description

cyclin A1 [Source:ZFIN;Acc:ZDB-GENE-040311-2]

Location

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 277 variant alleles and maps to 82 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000002166.8	CCNA1-201	1722	391aa	ENSDARP00000020968.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGH4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187371.1	CCNA1-203	4382	391aa	ENSDARP00000149259.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGH4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141201.2	CCNA1-202	994	281aa	ENSDARP00000115807.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 994 bps, Translation length: 281 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000141201.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.