Transcript: ENSDART00000141069.2 bbs10-202

Description

Bardet-Biedl syndrome 10 [Source:ZFIN;Acc:ZDB-GENE-060503-355]

Gene Synonyms

si:dkey-30c15.16

Location

Chromosome 18: 7,377,365-7,379,580 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 4 domains and features and maps to 94 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000069515.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000141069.2	bbs10-202	455	151aa	ENSDARP00000121514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LX37	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000101238.3	bbs10-201	2131	565aa	ENSDARP00000092012.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q9F8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000178284.2	bbs10-203	1824	567aa	ENSDARP00000143740.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y9A6	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 455 bps, Translation length: 151 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000141069.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000141069.2 bbs10-202

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Transcript: ENSDART00000141069.2 bbs10-202

Summary

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