Transcript: ENSDART00000141066.2 cop1-203

Description

COP1 E3 ubiquitin ligase [Source:ZFIN;Acc:ZDB-GENE-070410-134]

Gene Synonyms

rfwd2, zgc:163067

Location

About this transcript

This transcript has 5 exons, is associated with 205 variant alleles and maps to 97 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000113609.4	cop1-201	2617	694aa	ENSDARP00000101197.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0UY40	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141066.2	cop1-203	710	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000140544.2	cop1-202	540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 710 bps,

Version

ENSDART00000141066.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.