Transcript: ENSDART00000141030.4 pde4ca-202

Description

phosphodiesterase 4C, cAMP-specific a [Source:ZFIN;Acc:ZDB-GENE-070912-373]

Gene Synonyms

Pde43, im:7160317, pde4c, si:dkey-149i17.5

Location

About this transcript

This transcript has 15 exons, is annotated with 27 domains and features, is associated with 339 variant alleles and maps to 302 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000141030.4	pde4ca-202	5860	723aa	ENSDARP00000122498.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QR03	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000002096.8	pde4ca-201	2091	696aa	ENSDARP00000012865.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QBD6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145692.2	pde4ca-203	348	58aa	ENSDARP00000114998.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QDD6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000146402.2	pde4ca-204	898	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 5,860 bps, Translation length: 723 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000141030.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.