Transcript: ENSDART00000141007.2 zgc:162698-202

Description

zgc:162698 [Source:ZFIN;Acc:ZDB-GENE-041111-185]

Gene Synonyms

im:7143321, wu:fc14d01

Location

About this transcript

This transcript has 13 exons, is annotated with 27 domains and features, is associated with 259 variant alleles and maps to 112 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109482.3	zgc:162698-201	2588	583aa	ENSDARP00000100667.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1REF3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000145748.3	zgc:162698-203	2588	583aa	ENSDARP00000115155.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32T8B2	-
ENSDART00000179123.2	zgc:162698-204	1876	582aa	ENSDARP00000143751.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y994	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141007.2	zgc:162698-202	1285	333aa	ENSDARP00000123025.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,285 bps, Translation length: 333 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000141007.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.