Transcript: ENSDART00000140910.2 PTCH2-201

Description

patched 2 [Source:ZFIN;Acc:ZDB-GENE-980526-44]

Location

About this transcript

This transcript has 21 exons, is annotated with 63 domains and features, is associated with 402 variant alleles and maps to 191 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000077304.6	PTCH2-202	4853	1442aa	ENSDARP00000071771.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8S0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140910.2	PTCH2-201	4420	1383aa	ENSDARP00000121513.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 4,420 bps, Translation length: 1,383 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000140910.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.