Transcript: ENSDART00000140890.4 PNPLA6-203

Description

patatin-like phospholipase domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050107-4]

Location

About this transcript

This transcript has 34 exons, is annotated with 39 domains and features, is associated with 205 variant alleles and maps to 314 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000140890.4	PNPLA6-203	7644	1342aa	ENSDARP00000122326.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R844	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139219.4	PNPLA6-201	771	257aa	ENSDARP00000116275.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000144735.2	PNPLA6-202	638	212aa	ENSDARP00000123114.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 34, Coding exons: 33, Transcript length: 7,644 bps, Translation length: 1,342 residues

Version

ENSDART00000140890.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.