Transcript: ENSDART00000140864.2 zgc:162611-202

Description

zgc:162611 [Source:ZFIN;Acc:ZDB-GENE-070410-87]

Location

About this transcript

This transcript has 2 exons, is annotated with 4 domains and features, is associated with 305 variant alleles and maps to 170 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000140864.2	zgc:162611-202	2004	430aa	ENSDARP00000120608.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QBC2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138865.2	zgc:162611-201	847	182aa	ENSDARP00000122536.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QGH6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 2,004 bps, Translation length: 430 residues

Version

ENSDART00000140864.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.