Transcript: ENSDART00000140844.2 slitrk3b-202

Description

SLIT and NTRK-like family, member 3b [Source:ZFIN;Acc:ZDB-GENE-070912-352]

Location

About this transcript

This transcript has 2 exons, is annotated with 40 domains and features, is associated with 132 variant alleles and maps to 61 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000140844.2	slitrk3b-202	3043	882aa	ENSDARP00000113605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S7B6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000110447.4	slitrk3b-201	2649	882aa	ENSDARP00000101275.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S7B6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 3,043 bps, Translation length: 882 residues

Version

ENSDART00000140844.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.