Transcript: ENSDART00000140840.2 ftr35-202

Description

finTRIM family, member 35 [Source:ZFIN;Acc:ZDB-GENE-070912-111]

Gene Synonyms

si:ch211-150h8.9

Location

Chromosome 2: 59,295,260-59,303,406 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 26 domains and features, is associated with 215 variant alleles and maps to 400 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000089388.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000140840.2	ftr35-202	1584	505aa	ENSDARP00000122720.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S647	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000100987.5	ftr35-201	729	243aa	ENSDARP00000091759.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QDQ1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,584 bps, Translation length: 505 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000140840.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000140840.2 ftr35-202

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Transcript: ENSDART00000140840.2 ftr35-202

Summary

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