Transcript: ENSDART00000140829.3 si:dkey-78l4.10-202

Description

si:dkey-78l4.10 [Source:ZFIN;Acc:ZDB-GENE-060503-175]

Location

About this transcript

This transcript has 6 exons, is annotated with 16 domains and features, is associated with 231 variant alleles and maps to 261 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000140829.3	si:dkey-78l4.10-202	866	261aa	ENSDARP00000117657.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QY57	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000135168.3	si:dkey-78l4.10-201	655	219aa	ENSDARP00000114346.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QIR7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 866 bps, Translation length: 261 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000140829.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.